BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A06LP1|AL426623
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1626 0.0
>3x_Contig1042
Length = 3616
Score = 1626 bits (820), Expect = 0.0
Identities = 826/828 (99%)
Strand = Plus / Plus
Query: 1 gctgtgactccattcgaagccatcaagactgcattgatcgatgataagcaagctgctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1198 gctgtgactccattcgaagccatcaagactgcattgatcgatgataagcaagctgctgtg 1257
Query: 61 ccaaaatatcaaaataacgggaaaggtatggtgagcaattatgctaagcttttatccgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1258 ccaaaatatcaaaataacgggaaaggtatggtgagcaattatgctaagcttttatccgat 1317
Query: 121 caaggattttctggtctttatagaggtgtcttaccagtttccatgagacaagctgcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 caaggattttctggtctttatagaggtgtcttaccagtttccatgagacaagctgcaaat 1377
Query: 181 caagccgttagattgggttgttataacaagatcaagactttggtgcaagattacacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1378 caagccgttagattgggttgttataacaagatcaagactttggtgcaagattacacaaac 1437
Query: 241 gtacctaaggataaacctttgagttcaggtttgaccttcattgtaggtgccttcagtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 gtacctaaggataaacctttgagttcaggtttgaccttcattgtaggtgccttcagtggt 1497
Query: 301 atcgttaccgtttatacgacaatgcctatcgataccgttaagacaagaatgcaatctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 atcgttaccgtttatacgacaatgcctatcgataccgttaagacaagaatgcaatctttg 1557
Query: 361 aatgcaggccaatattcttctactattaactgtttcgctaccattttcaaggaggaaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 aatgcaggccaatattcttctactattaactgtttcgctaccattttcaaggaggaaggt 1617
Query: 421 ttgaagactttctggaaaggtgctactccaagattgggtagattgatcctttctggtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1618 ttgaagactttctggaaaggtgctactccaagattgggtagattgatcctttctggtggt 1677
Query: 481 attgtcttcaccatctatgagaaggtattgacggttttggcataattagcctttcagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1678 attgtcttcaccatctatgagaaggtattgacggttttggcataattagcctttcagctt 1737
Query: 541 tcttagtgtgtaacaaacgtgtagtttacttataaaacaaaaaatactaaacgataatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1738 tcttagtgtgtaacaaacgtgtagtttacttataaaacaaaaaatactaaacgataatct 1797
Query: 601 taatccgcatcataaagatgatcggccatttgatgagaatcttttccatctatattgtta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1798 taatccgcatcataaagatgatcggccatttgatgagaatcttttccatctatattgtta 1857
Query: 661 tgatatacaaaaaaatataatacacatgtttgcatatatccacatgagagacatcaaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1858 tgatatacaaaaaaatataatacacatgtttgcatatatccacatgagagacatcaaaca 1917
Query: 721 tgccgaatagcatcaggtaaaaggaaccattgtatcatgaaatagattaaaagagtaatt 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1918 tgccgaatagcatcaggtaaaaggaaccattgtatcatgaaatagattaacagagtaatt 1977
Query: 781 tggtcatagggtgcactgaattaagagaagacaaaaatttcctttttg 828
||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1978 tggtcatagggtgtactgaattaagagaagacaaaaatttcctttttg 2025
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6790
Number of Sequences: 1807
Number of extensions: 6790
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)